STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36273.1Hypothetical protein. (99 aa)    
Predicted Functional Partners:
rbsD
Ribose ABC transport system high affinity permease RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
     
 0.748
EEX37038.1
Hypothetical protein.
  
     0.694
EEX37506.1
Hypothetical protein.
  
     0.662
EEX36456.1
MoxR-like ATPase.
  
     0.638
EEX37358.1
Hypothetical protein.
  
     0.629
EEX37917.1
Hypothetical protein.
  
     0.588
EEX38271.1
Hypothetical protein.
  
     0.561
EEX35996.1
Lactoylglutathione lyase.
  
     0.538
EEX37314.1
Hypothetical protein.
  
     0.534
EEX37594.1
Outer membrane porin protein.
  
     0.520
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.