STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rbsKRibokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (306 aa)    
Predicted Functional Partners:
rbsD
Ribose ABC transport system high affinity permease RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
 
 0.969
EEX36277.1
Ribose ABC transport system ribose-binding protein RbsB; TC 3.A.1.2.1.
 
  
 0.921
EEX36279.1
Ribose operon repressor.
 
 0.855
EEX36350.1
Inosine-uridine preferring nucleoside hydrolase; Belongs to the IUNH family.
 
 
 0.854
EEX35717.1
Phosphotransferase system fructose-specific.
    
 0.848
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
 0.809
EEX36276.1
Ribose ABC transport system permease protein RbsC; TC 3.A.1.2.1; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.808
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
  
 
 0.804
EEX36275.1
Ribose ABC transport system ATP-binding protein RbsA; TC 3.A.1.2.1.
 
  
 0.781
EEX35969.1
Phosphotransferase system fructose-specific IIB and IIC subunit.
     
 0.770
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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