STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36282.1Putative TonB-dependent heme receptor HasR. (750 aa)    
Predicted Functional Partners:
EEX36355.1
Ferric siderophore transport system binding protein TonB.
 
 
 
 0.739
EEX37984.1
MSHA biogenesis protein MshQ.
    
   0.727
EEX35830.1
Chromosome segregation ATPase.
    
   0.727
EEX37138.1
Ferric siderophore transport system binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
   
 
 0.682
EEX37575.1
AAA ATPase.
   
 
 0.682
EEX37412.1
TonB-dependent heme receptor.
 
  
 0.649
EEX36354.1
TonB-dependent heme and hemoglobin receptor HutA; Most likely function alternative not yet resolved; TonB-dependent hemin ferrichrome receptor.
 
  
 0.547
EEX36283.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
       0.507
EEX36328.1
Receptor protein mostly Fe transport.
 
  
 0.476
EEX37392.1
ABC-type oligopeptide transport system component; COG4166.
   
   0.474
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.