STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36288.1Transcriptional repressor of aga operon. (258 aa)    
Predicted Functional Partners:
EEX35968.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.774
EEX35717.1
Phosphotransferase system fructose-specific.
 
  
 0.768
EEX35969.1
Phosphotransferase system fructose-specific IIB and IIC subunit.
 
  
 0.656
EEX36290.1
Putative tagatose-6-phosphate ketose/aldose isomerase.
 
    0.642
EEX36289.1
Tagatose-6-phosphate kinase agaZ.
 
    0.590
EEX36126.1
Ribose 5-phosphate isomerase.
  
 
 0.575
EEX36292.1
Putative phosphotransferase system enzyme subunit.
 
  
 0.437
EEX36291.1
PTS system N-acetylgalactosamine-specific IIB component.
  
    0.434
EEX36080.1
Anaerobic glycerol-3-phosphate dehydrogenase subunit A.
 
  
 0.420
EEX35902.1
5-keto-2-deoxygluconokinase B.
  
  
 0.414
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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