Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EEX36307.1BatD. (547 aa)    
Predicted Functional Partners:
EEX36308.1
TPR domain protein in aerotolerance operon.
 
 
 0.980
EEX36309.1
Protein BatA; Bacteroides aerotolerance operon.
 
   
 0.965
EEX36310.1
Hypothetical protein.
 
  
 0.928
EEX36311.1
MoxR-like ATPase in aerotolerance operon.
 
  
 0.818
EEX36592.1
Hypothetical protein.
 
 
 0.759
EEX37195.1
Tail-specific protease precursor.
  
 
 0.731
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
   
   0.677
EEX37131.1
Methyl-accepting chemotaxis sensory transducer.
     
  0.628
cmoB
tRNA (5-methoxyuridine) 34 synthase; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.
 
     0.533
cmoA
tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).
 
     0.494
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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