Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EEX36319.1Flavohemoprotein; Belongs to the globin family. (399 aa)    
Predicted Functional Partners:
EEX36172.1
Hybrid sensory histidine kinase in two-component regulatory system with EvgA.
  
 
 0.863
EEX37815.1
Aerobic respiration control sensor protein ArcB.
  
 
 0.848
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
  
  
 0.784
EEX36766.1
2,4-dienoyl-CoA reductase [NADPH].
    
 0.768
EEX35658.1
Multi-sensor hybrid histidine kinase.
    
 0.730
EEX35659.1
Signal transduction histidine kinase.
    
 0.729
EEX38295.1
C-di-GMP phosphodiesterase A-related protein.
  
 
 0.726
EEX37050.1
Chemotaxis protein CheV.
 
 
 0.708
EEX36245.1
Proline dehydrogenase (Proline oxidase)/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
 0.698
EEX37312.1
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor.
    
 0.695
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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