STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nnrEYjeF protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of [...] (491 aa)    
Predicted Functional Partners:
EEX38047.1
ADP compounds hydrolase NudE; Belongs to the Nudix hydrolase family.
 
 0.948
EEX36003.1
ADP-ribose pyrophosphatase.
 
 0.947
EEX38390.1
ADP-ribose pyrophosphatase.
  
 0.940
EEX37829.1
MutT protein [7,8-dihydro-8-oxoguanine-triphosphatase]; Belongs to the Nudix hydrolase family.
  
 0.940
srmB
ATP-dependent RNA helicase SrmB; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily.
   
 0.800
EEX38196.1
ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family.
   
 0.800
EEX37668.1
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
   
 0.800
EEX36005.1
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
   
 0.800
EEX36249.1
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
   
 0.800
EEX36300.1
ATP-dependent RNA helicase RhlE; Belongs to the DEAD box helicase family.
   
 0.800
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.