STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX36342.1PvcB protein. (282 aa)    
Predicted Functional Partners:
EEX36345.1
PvcA protein.
 
 
 0.960
EEX36343.1
FAD monooxygenase PheA/TfdB family.
 
  
  0.927
EEX37268.1
Diaminobutyrate-pyruvate transaminase/L-2,4-diaminobutyrate decarboxylase.
  
 
 0.842
EEX36330.1
Non-ribosomal peptide synthetase modules and related protein.
 
  
 0.771
EEX36103.1
Flavodoxin reductases, family 1.
   
 
  0.709
EEX36824.1
NADH oxidoreductase Hcr.
   
 
  0.707
EEX36701.1
2-oxoglutarate dehydrogenase E1 component.
   
   0.680
EEX37912.1
Hypothetical protein.
  
     0.679
EEX37913.1
Hypothetical protein.
  
     0.674
EEX38145.1
Hypothetical protein.
  
     0.616
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.