STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36353.1Ribosyl nicotinamide transporter PnuC-like protein. (248 aa)    
Predicted Functional Partners:
EEX36352.1
N-Ribosylnicotinamide phosphorylase.
     
 0.796
EEX36872.1
Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
  
  
 0.762
EEX36841.1
Hypothetical protein; Belongs to the UPF0304 family.
  
     0.669
EEX36351.1
Predicted N-ribosylNicotinamide CRP-like regulator.
 
     0.645
EEX38423.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
   
  
 0.572
EEX37592.1
HTH-type transcriptional regulator CueR.
  
     0.511
EEX36682.1
Hypothetical protein.
  
     0.498
EEX37653.1
Hypothetical protein; Belongs to the UPF0253 family.
  
     0.492
EEX38206.1
Protein YtfJ precursor.
  
     0.480
EEX36936.1
TrkA Potassium channel-family protein.
  
     0.480
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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