STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36362.1CAAX amino terminal protease family. (279 aa)    
Predicted Functional Partners:
EEX36528.1
NADPH-flavin oxidoreductase; Belongs to the flavin oxidoreductase frp family.
  
  
 0.686
EEX37048.1
ABC-type multidrug transport system permease component.
 
  
 0.556
EEX37047.1
ABC-type multidrug transport system permease component.
 
  
 0.552
EEX38364.1
ABC-type multidrug transport system permease component.
  
  
 0.490
EEX38365.1
ABC-type multidrug transport system ATPase component.
  
 
 0.476
EEX36913.1
ABC transporter ATP-binding protein.
  
 
 0.476
EEX37294.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.476
mnmC
5-methylaminomethyl-2-thiouridine-forming enzyme MnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.
  
    0.448
tyrS-2
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
       0.436
EEX36172.1
Hybrid sensory histidine kinase in two-component regulatory system with EvgA.
 
   
 0.429
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.