STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36388.12-keto-4-pentenoate hydratase. (204 aa)    
Predicted Functional Partners:
EEX37340.1
Fe-S oxidoreductase; Similar to lactate dehydrogenase SO1521.
  
 
 0.798
EEX36392.1
Predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing.
  
 
 0.798
EEX37238.1
Fumarate hydratase class I aerobic.
    
  0.763
EEX37239.1
Fumarate hydratase class I.
    
  0.763
EEX37119.1
Homogentisate 1,2-dioxygenase.
  
  
 0.733
EEX36766.1
2,4-dienoyl-CoA reductase [NADPH].
    
 0.671
EEX36822.1
Alcohol dehydrogenase; Most likely function alternative not yet resolved; acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.649
fumC
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
   
 0.647
EEX38107.1
5-carboxymethyl-2-hydroxymuconate delta-isomerase.
  
 
 0.614
EEX37121.1
Maleylacetoacetate isomerase/glutathione S-transferase.
  
 
 0.593
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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