STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36407.1Putative lipase. (683 aa)    
Predicted Functional Partners:
EEX37139.1
tPR domain protein putative component of TonB system.
  
  
 0.767
EEX37471.1
Membrane protein.
 
     0.762
EEX37523.1
ATPase involved in DNA repair.
  
     0.752
EEX38201.1
Hypothetical protein.
  
     0.747
EEX37997.1
MSHA biogenesis protein MshI.
  
     0.745
EEX38594.1
Hypothetical protein.
  
     0.740
EEX37282.1
Lipase precursor.
 
 
 0.735
EEX36606.1
Hypothetical protein.
  
     0.733
EEX36762.1
Hypothetical protein.
  
     0.729
EEX38043.1
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.718
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.