STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36458.1Hypothetical protein. (256 aa)    
Predicted Functional Partners:
EEX38271.1
Hypothetical protein.
  
     0.695
EEX37315.1
Microbial collagenase secreted.
  
     0.692
EEX38003.1
Lipid A core-O-antigen ligase.
  
     0.660
EEX37699.1
Oligoendopeptidase F.
  
     0.608
EEX38145.1
Hypothetical protein.
  
     0.604
EEX36215.1
Chitinase.
  
     0.574
EEX36156.1
Phospholipase/lecithinase/hemolysin.
  
     0.566
EEX37917.1
Hypothetical protein.
  
     0.561
EEX37715.1
Chitinase.
  
     0.544
EEX37824.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.523
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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