rpmI protein (Vibrio metschnikovii) - STRING interaction network

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Score

rpmI

LSU ribosomal protein L35p; Belongs to the bacterial ribosomal protein bL35 family. (64 aa)

Predicted Functional Partners:

rplT

0.998

rpmF

0.995

rpsF

0.995

rplJ

0.995

rplD

0.994

rpmC

0.994

rpsD

0.994

rpsB

0.994

rplM

0.994

rpsP

0.994

Your Current Organism:

Vibrio metschnikovii

NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplD	rplJ	VIB_000539	VIB_003098	LSU ribosomal protein L4p (L1e); Forms part of the polypeptide exit tunnel.	LSU ribosomal protein L10p (P0); Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.998
rplD	rplM	VIB_000539	VIB_001983	LSU ribosomal protein L4p (L1e); Forms part of the polypeptide exit tunnel.	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.997
rplD	rplT	VIB_000539	VIB_002781	LSU ribosomal protein L4p (L1e); Forms part of the polypeptide exit tunnel.	LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.995
rplD	rpmC	VIB_000539	VIB_000546	LSU ribosomal protein L4p (L1e); Forms part of the polypeptide exit tunnel.	LSU ribosomal protein L29p (L35e); Belongs to the universal ribosomal protein uL29 family.	0.999
rplD	rpmF	VIB_000539	VIB_001618	LSU ribosomal protein L4p (L1e); Forms part of the polypeptide exit tunnel.	LSU ribosomal protein L32p; Belongs to the bacterial ribosomal protein bL32 family.	0.989
rplD	rpmI	VIB_000539	VIB_002780	LSU ribosomal protein L4p (L1e); Forms part of the polypeptide exit tunnel.	LSU ribosomal protein L35p; Belongs to the bacterial ribosomal protein bL35 family.	0.994
rplD	rpsB	VIB_000539	VIB_000665	LSU ribosomal protein L4p (L1e); Forms part of the polypeptide exit tunnel.	SSU ribosomal protein S2p (SAe); Belongs to the universal ribosomal protein uS2 family.	0.999
rplD	rpsD	VIB_000539	VIB_000562	LSU ribosomal protein L4p (L1e); Forms part of the polypeptide exit tunnel.	SSU ribosomal protein S4p (S9e); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.999
rplD	rpsF	VIB_000539	VIB_002155	LSU ribosomal protein L4p (L1e); Forms part of the polypeptide exit tunnel.	SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA.	0.993
rplD	rpsP	VIB_000539	VIB_001991	LSU ribosomal protein L4p (L1e); Forms part of the polypeptide exit tunnel.	SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family.	0.993
rplJ	rplD	VIB_003098	VIB_000539	LSU ribosomal protein L10p (P0); Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	LSU ribosomal protein L4p (L1e); Forms part of the polypeptide exit tunnel.	0.998
rplJ	rplM	VIB_003098	VIB_001983	LSU ribosomal protein L10p (P0); Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.997
rplJ	rplT	VIB_003098	VIB_002781	LSU ribosomal protein L10p (P0); Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.994
rplJ	rpmC	VIB_003098	VIB_000546	LSU ribosomal protein L10p (P0); Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	LSU ribosomal protein L29p (L35e); Belongs to the universal ribosomal protein uL29 family.	0.998
rplJ	rpmF	VIB_003098	VIB_001618	LSU ribosomal protein L10p (P0); Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	LSU ribosomal protein L32p; Belongs to the bacterial ribosomal protein bL32 family.	0.990
rplJ	rpmI	VIB_003098	VIB_002780	LSU ribosomal protein L10p (P0); Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	LSU ribosomal protein L35p; Belongs to the bacterial ribosomal protein bL35 family.	0.995
rplJ	rpsB	VIB_003098	VIB_000665	LSU ribosomal protein L10p (P0); Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	SSU ribosomal protein S2p (SAe); Belongs to the universal ribosomal protein uS2 family.	0.996
rplJ	rpsD	VIB_003098	VIB_000562	LSU ribosomal protein L10p (P0); Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	SSU ribosomal protein S4p (S9e); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.995
rplJ	rpsF	VIB_003098	VIB_002155	LSU ribosomal protein L10p (P0); Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA.	0.995
rplJ	rpsP	VIB_003098	VIB_001991	LSU ribosomal protein L10p (P0); Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family.	0.991

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