Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX36478.1Hypothetical protein. (93 aa)    
Predicted Functional Partners:
EEX38477.1
Transposase.
  
     0.529
EEX35997.1
Hypothetical protein.
  
     0.484
EEX36049.1
Hypothetical protein.
  
     0.483
EEX36479.1
GCN5-related N-acetyltransferase.
       0.441
EEX37043.1
Hypothetical protein; Predicted metal-dependent hydrolase.
  
     0.428
EEX37891.1
Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
  
     0.415
EEX37081.1
Hypothetical protein.
 
     0.412
EEX37012.1
Hypothetical protein.
  
     0.403
EEX38113.1
Membrane protein.
  
     0.401
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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