STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX35703.1Signal transduction protein; Containing cAMP-binding and CBS domains. (607 aa)    
Predicted Functional Partners:
EEX35704.1
DNA polymerase III epsilon subunit.
 
 
  0.979
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
    
 0.864
EEX37817.1
Glutamate synthase [NADPH] large chain.
    
 0.841
EEX38069.1
Acetate permease ActP (cation/acetate symporter); Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.838
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
    
  0.829
EEX37250.1
DNA polymerase III epsilon subunit.
 
 
  0.796
EEX35904.1
DNA polymerase III epsilon subunit.
 
 
  0.792
EEX36120.1
DNA polymerase III epsilon subunit.
 
 
  0.774
EEX36172.1
Hybrid sensory histidine kinase in two-component regulatory system with EvgA.
    
 0.745
argH
Argininosuccinate lyase; In the N-terminal section; belongs to the lyase 1 family. Argininosuccinate lyase subfamily.
    
  0.739
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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