STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX35704.1DNA polymerase III epsilon subunit. (215 aa)    
Predicted Functional Partners:
EEX35703.1
Signal transduction protein; Containing cAMP-binding and CBS domains.
 
 
  0.986
EEX36579.1
DNA polymerase III alpha subunit.
    
 0.955
EEX35904.1
DNA polymerase III epsilon subunit.
  
  
  0.945
EEX35652.1
DNA polymerase III beta subunit.
   
 0.945
EEX36120.1
DNA polymerase III epsilon subunit.
  
  
  0.944
dnaX
DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
    
 0.941
EEX37611.1
DNA polymerase III delta subunit.
    
 0.922
EEX37483.1
DNA polymerase III delta prime subunit.
    
  0.914
EEX37249.1
Signal transduction protein; Containing cAMP-binding and CBS domains.
 
 
  0.913
EEX36121.1
Signal transduction protein; Containing cAMP-binding and CBS domains.
 
 
  0.913
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.