STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX35731.1Membrane-bound lytic murein transglycosylase C precursor. (446 aa)    
Predicted Functional Partners:
EEX35732.1
Conserved hypothetical protein.
 
     0.697
EEX35601.1
N-acetylmuramoyl-L-alanine amidase AmiB precursor.
  
 
 0.640
EEX36659.1
Flagellar hook-associated protein FliD.
  
  
 0.527
EEX35733.1
Hypothetical protein.
       0.513
EEX36618.1
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
  
 
 0.512
fliE
Flagellar hook-basal body complex protein FliE.
  
  
 0.474
EEX36668.1
Flagellum-specific ATP synthase FliI.
  
  
 0.470
EEX35734.1
Hypothetical protein.
       0.459
EEX36616.1
Flagellar hook protein FlgE.
  
    0.447
EEX36672.1
Flagellar motor switch protein FliM.
  
    0.446
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.