STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX35737.1ABC transporter, permease protein. (698 aa)    
Predicted Functional Partners:
fbpC
ABC transporter, ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
 
 0.974
EEX35738.1
ABC transporter, periplasmic substrate-binding protein.
 
 
 0.974
EEX37293.1
Ferric iron ABC transporter iron-binding protein.
 
 
 0.950
EEX36881.1
Extracellular solute-binding protein family 1.
 
 
 0.925
EEX38335.1
Ferric iron ABC transporter iron-binding protein.
 
 
 0.893
EEX36880.1
Ferric iron ABC transporter ATP-binding protein.
 
 0.888
EEX38337.1
iron(III) ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.846
potA
Spermidine putrescine transport ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
  
 0.821
EEX38336.1
Ferric iron ABC transporter permease protein.
  
  
 
0.771
EEX37294.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
  0.714
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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