STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX35751.1Putative bacterial regulatory protein GntR. (240 aa)    
Predicted Functional Partners:
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
    
  0.799
EEX35958.1
2-aminoethylphosphonate uptake and metabolism regulator.
  
   
 0.744
gcvP
Glycine dehydrogenase [decarboxylating]; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
  0.721
EEX35752.1
PTS system alpha-glucoside-specific IIBC component.
 
  
 0.580
EEX38373.1
Transcriptional repressor for pyruvate dehydrogenase complex.
  
  
 0.548
EEX35753.1
Maltose-6'-phosphate glucosidase.
 
     0.493
EEX35754.1
Maltose-6'-phosphate glucosidase (6-phospho-alpha-D-glucosidase).
 
     0.485
EEX36125.1
Hypothetical protein.
  
    0.468
EEX36449.1
L-ectoine synthase.
  
    0.468
EEX37578.1
N-acetylglucosamine-6-phosphate deacetylase.
  
  
 0.465
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.