STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX35760.1UDP-glucose 4-epimerase. (319 aa)    
Predicted Functional Partners:
EEX35759.1
Lipid carrier : UDP-N-acetylgalactosaminyltransferase.
  
 0.989
EEX35761.1
Lipid carrier : UDP-N-acetylgalactosaminyltransferase/alpha-1, 3-N-acetylgalactosamine transferase PglA/putative glycosyltransferase.
 
 
 0.978
EEX35758.1
Nucleoside-diphosphate sugar epimerase/dehydratase.
 
 
 0.973
EEX35768.1
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.944
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
    
 0.878
EEX35792.1
Putative capsular polysaccharide biosynthesis protein.
 
 
 0.873
EEX35774.1
OtnA protein.
 
 
 0.849
EEX35791.1
Glycosyltransferase.
  
 
 0.830
EEX35778.1
Polysaccharide synthesis-related protein.
  
 
 0.820
rpsS
SSU ribosomal protein S19p (S15e); Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.817
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.