STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX35772.1OtnB protein. (336 aa)    
Predicted Functional Partners:
EEX35774.1
OtnA protein.
 
 0.988
EEX35778.1
Polysaccharide synthesis-related protein.
  
 0.949
EEX35760.1
UDP-glucose 4-epimerase.
 
 
 0.853
EEX35758.1
Nucleoside-diphosphate sugar epimerase/dehydratase.
  
 
 0.842
EEX35771.1
dTDP-glucose 4,6-dehydratase.
     
 0.806
EEX35759.1
Lipid carrier : UDP-N-acetylgalactosaminyltransferase.
 
 
 0.780
EEX36791.1
Mrp protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.686
EEX36401.1
Predicted transcriptional regulator.
  
     0.670
EEX38124.1
Serine acetyltransferase.
  
 
 0.663
EEX36828.1
Hypothetical protein.
  
     0.547
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.