Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX35778.1Polysaccharide synthesis-related protein. (274 aa)    
Predicted Functional Partners:
EEX35777.1
Hypothetical protein.
 
  
 0.968
EEX35779.1
Hypothetical WbfB-like protein.
 
  
 0.963
EEX35772.1
OtnB protein.
  
 0.936
EEX36791.1
Mrp protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 0.840
EEX35760.1
UDP-glucose 4-epimerase.
  
 
 0.820
EEX35759.1
Lipid carrier : UDP-N-acetylgalactosaminyltransferase.
  
 
 0.741
EEX35758.1
Nucleoside-diphosphate sugar epimerase/dehydratase.
  
 
 0.701
EEX35784.1
RfaL protein.
  
 
 0.539
EEX36287.1
Cell filamentation protein Fic.
  
     0.531
EEX36223.1
Hypothetical protein.
  
     0.519
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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