Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEX35760.1 | EEX35768.1 | VIB_002909 | VIB_002917 | UDP-glucose 4-epimerase. | DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.900 |
| EEX35760.1 | EEX35784.1 | VIB_002909 | VIB_002933 | UDP-glucose 4-epimerase. | RfaL protein. | 0.673 |
| EEX35760.1 | EEX35785.1 | VIB_002909 | VIB_002934 | UDP-glucose 4-epimerase. | ADP-heptose--lipooligosaccharide heptosyltransferase II. | 0.468 |
| EEX35760.1 | EEX35786.1 | VIB_002909 | VIB_002935 | UDP-glucose 4-epimerase. | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.472 |
| EEX35760.1 | EEX35787.1 | VIB_002909 | VIB_002936 | UDP-glucose 4-epimerase. | Transferase hexapeptide repeat family. | 0.576 |
| EEX35760.1 | EEX38124.1 | VIB_002909 | VIB_000494 | UDP-glucose 4-epimerase. | Serine acetyltransferase. | 0.788 |
| EEX35768.1 | EEX35760.1 | VIB_002917 | VIB_002909 | DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | UDP-glucose 4-epimerase. | 0.900 |
| EEX35768.1 | EEX35787.1 | VIB_002917 | VIB_002936 | DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | Transferase hexapeptide repeat family. | 0.654 |
| EEX35768.1 | EEX38124.1 | VIB_002917 | VIB_000494 | DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | Serine acetyltransferase. | 0.713 |
| EEX35784.1 | EEX35760.1 | VIB_002933 | VIB_002909 | RfaL protein. | UDP-glucose 4-epimerase. | 0.673 |
| EEX35784.1 | EEX35785.1 | VIB_002933 | VIB_002934 | RfaL protein. | ADP-heptose--lipooligosaccharide heptosyltransferase II. | 0.926 |
| EEX35784.1 | EEX35786.1 | VIB_002933 | VIB_002935 | RfaL protein. | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.918 |
| EEX35784.1 | EEX35787.1 | VIB_002933 | VIB_002936 | RfaL protein. | Transferase hexapeptide repeat family. | 0.616 |
| EEX35784.1 | lpxM | VIB_002933 | VIB_002932 | RfaL protein. | Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A. | 0.575 |
| EEX35785.1 | EEX35760.1 | VIB_002934 | VIB_002909 | ADP-heptose--lipooligosaccharide heptosyltransferase II. | UDP-glucose 4-epimerase. | 0.468 |
| EEX35785.1 | EEX35784.1 | VIB_002934 | VIB_002933 | ADP-heptose--lipooligosaccharide heptosyltransferase II. | RfaL protein. | 0.926 |
| EEX35785.1 | EEX35786.1 | VIB_002934 | VIB_002935 | ADP-heptose--lipooligosaccharide heptosyltransferase II. | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.955 |
| EEX35785.1 | EEX35787.1 | VIB_002934 | VIB_002936 | ADP-heptose--lipooligosaccharide heptosyltransferase II. | Transferase hexapeptide repeat family. | 0.626 |
| EEX35785.1 | lpxM | VIB_002934 | VIB_002932 | ADP-heptose--lipooligosaccharide heptosyltransferase II. | Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A. | 0.787 |
| EEX35786.1 | EEX35760.1 | VIB_002935 | VIB_002909 | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | UDP-glucose 4-epimerase. | 0.472 |
page 1 of 2