STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX35829.1Serine/threonine protein kinase. (445 aa)    
Predicted Functional Partners:
EEX36592.1
Hypothetical protein.
  
 
 0.960
EEX35831.1
DNA-directed RNA polymerase specialized sigma subunit.
 
 
 0.922
EEX37815.1
Aerobic respiration control sensor protein ArcB.
  
 0.893
EEX36172.1
Hybrid sensory histidine kinase in two-component regulatory system with EvgA.
  
 0.889
EEX38405.1
BarA sensory histidine kinase.
  
 0.883
EEX35659.1
Signal transduction histidine kinase.
 
 
 0.882
EEX38325.1
Chitin catabolic cascade sensor histidine kinase ChiS.
  
 0.862
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
 
 0.859
EEX35658.1
Multi-sensor hybrid histidine kinase.
   
 0.857
EEX37050.1
Chemotaxis protein CheV.
  
 
 0.853
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.