STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX35830.1Chromosome segregation ATPase. (352 aa)    
Predicted Functional Partners:
EEX36157.1
Regulatory P domain of the subtilisin-like proprotein convertase.
  
 0.986
EEX35831.1
DNA-directed RNA polymerase specialized sigma subunit.
   
  0.915
EEX37405.1
Alkaline serine protease.
  
 0.891
EEX37519.1
Cell division protein FtsK.
    
 
 0.891
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.879
EEX38342.1
TonB-dependent receptor; Most likely function alternative not yet resolved; outer membrane receptor for ferrienterochelin and colicins.
    
 
 0.867
EEX37933.1
TonB-dependent heme receptor.
    
 
 0.867
EEX37195.1
Tail-specific protease precursor.
  
   0.847
EEX35829.1
Serine/threonine protein kinase.
  
  
 0.843
EEX35832.1
Hypothetical protein.
       0.800
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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