Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EEX35837.1Peptide ABC transporter permease protein. (325 aa)    
Predicted Functional Partners:
EEX35836.1
Peptide ABC transporter permease component.
 
 0.998
EEX35838.1
Peptide ABC transporter peptide-binding protein.
 
 0.995
EEX35839.1
Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.995
EEX38328.1
Peptide ABC transporter permease component.
 
 0.973
EEX37063.1
ABC-type dipeptide/oligopeptide/nickel transport system permease component.
 
 0.973
EEX38330.1
(GlcNAc)2 ABC transporter ATP-binding component 2; Belongs to the ABC transporter superfamily.
 
 0.957
EEX37064.1
ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; Belongs to the ABC transporter superfamily.
 
 0.956
EEX38329.1
(GlcNAc)2 ABC transporter ATP-binding component 1; Belongs to the ABC transporter superfamily.
 
 0.953
EEX37065.1
ABC-type oligopeptide transport system ATPase component; Belongs to the ABC transporter superfamily.
 
 0.951
EEX36451.1
Peptide ABC transporter permease component.
 
 0.943
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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