Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEX92372.1 | EEX92809.1 | VIA_003017 | VIA_003454 | Formate dehydrogenase-O major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 2,4-dienoyl-CoA reductase [NADPH]. | 0.771 |
EEX92372.1 | EEX93338.1 | VIA_003017 | VIA_003985 | Formate dehydrogenase-O major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.464 |
EEX92372.1 | EEX93830.1 | VIA_003017 | VIA_000987 | Formate dehydrogenase-O major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Assimilatory nitrate reductase large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.686 |
EEX92372.1 | EEX93898.1 | VIA_003017 | VIA_001056 | Formate dehydrogenase-O major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.464 |
EEX92372.1 | EEX95478.1 | VIA_003017 | VIA_000010 | Formate dehydrogenase-O major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.648 |
EEX92809.1 | EEX92372.1 | VIA_003454 | VIA_003017 | 2,4-dienoyl-CoA reductase [NADPH]. | Formate dehydrogenase-O major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.771 |
EEX92809.1 | EEX93358.1 | VIA_003454 | VIA_004005 | 2,4-dienoyl-CoA reductase [NADPH]. | Predicted amidohydrolase. | 0.474 |
EEX92809.1 | EEX93830.1 | VIA_003454 | VIA_000987 | 2,4-dienoyl-CoA reductase [NADPH]. | Assimilatory nitrate reductase large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.792 |
EEX92809.1 | EEX95478.1 | VIA_003454 | VIA_000010 | 2,4-dienoyl-CoA reductase [NADPH]. | S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.665 |
EEX93304.1 | EEX95478.1 | VIA_003951 | VIA_000010 | Glycosyltransferase. | S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.645 |
EEX93338.1 | EEX92372.1 | VIA_003985 | VIA_003017 | Hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Formate dehydrogenase-O major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.464 |
EEX93338.1 | EEX93631.1 | VIA_003985 | VIA_000788 | Hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Putative oxidoreductase. | 0.542 |
EEX93338.1 | EEX93830.1 | VIA_003985 | VIA_000987 | Hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Assimilatory nitrate reductase large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.465 |
EEX93338.1 | EEX95478.1 | VIA_003985 | VIA_000010 | Hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.621 |
EEX93338.1 | tdh | VIA_003985 | VIA_001278 | Hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.542 |
EEX93358.1 | EEX92809.1 | VIA_004005 | VIA_003454 | Predicted amidohydrolase. | 2,4-dienoyl-CoA reductase [NADPH]. | 0.474 |
EEX93358.1 | EEX93631.1 | VIA_004005 | VIA_000788 | Predicted amidohydrolase. | Putative oxidoreductase. | 0.558 |
EEX93358.1 | EEX93830.1 | VIA_004005 | VIA_000987 | Predicted amidohydrolase. | Assimilatory nitrate reductase large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.534 |
EEX93358.1 | EEX95478.1 | VIA_004005 | VIA_000010 | Predicted amidohydrolase. | S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.617 |
EEX93358.1 | tdh | VIA_004005 | VIA_001278 | Predicted amidohydrolase. | L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.558 |
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