Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEX92205.1 | EEX92576.1 | VIA_002849 | VIA_003221 | Fe-S oxidoreductase; Similar to lactate dehydrogenase SO1521. | Fumarate hydratase class I aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.931 |
EEX92205.1 | EEX94992.1 | VIA_002849 | VIA_000455 | Fe-S oxidoreductase; Similar to lactate dehydrogenase SO1521. | Hypothetical protein. | 0.522 |
EEX92205.1 | astD | VIA_002849 | VIA_000456 | Fe-S oxidoreductase; Similar to lactate dehydrogenase SO1521. | Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | 0.772 |
EEX92205.1 | dapE | VIA_002849 | VIA_002318 | Fe-S oxidoreductase; Similar to lactate dehydrogenase SO1521. | N-succinyl-L,L-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.813 |
EEX92520.1 | EEX94992.1 | VIA_003165 | VIA_000455 | Hypothetical protein. | Hypothetical protein. | 0.409 |
EEX92576.1 | EEX92205.1 | VIA_003221 | VIA_002849 | Fumarate hydratase class I aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Fe-S oxidoreductase; Similar to lactate dehydrogenase SO1521. | 0.931 |
EEX92576.1 | EEX94992.1 | VIA_003221 | VIA_000455 | Fumarate hydratase class I aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Hypothetical protein. | 0.540 |
EEX92576.1 | astD | VIA_003221 | VIA_000456 | Fumarate hydratase class I aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | 0.789 |
EEX92893.1 | EEX93003.1 | VIA_003538 | VIA_003648 | Hypothetical protein. | Hypothetical protein. | 0.582 |
EEX92893.1 | EEX94992.1 | VIA_003538 | VIA_000455 | Hypothetical protein. | Hypothetical protein. | 0.441 |
EEX93003.1 | EEX92893.1 | VIA_003648 | VIA_003538 | Hypothetical protein. | Hypothetical protein. | 0.582 |
EEX93003.1 | EEX94992.1 | VIA_003648 | VIA_000455 | Hypothetical protein. | Hypothetical protein. | 0.540 |
EEX94492.1 | EEX94992.1 | VIA_001652 | VIA_000455 | Chitinase. | Hypothetical protein. | 0.453 |
EEX94992.1 | EEX92205.1 | VIA_000455 | VIA_002849 | Hypothetical protein. | Fe-S oxidoreductase; Similar to lactate dehydrogenase SO1521. | 0.522 |
EEX94992.1 | EEX92520.1 | VIA_000455 | VIA_003165 | Hypothetical protein. | Hypothetical protein. | 0.409 |
EEX94992.1 | EEX92576.1 | VIA_000455 | VIA_003221 | Hypothetical protein. | Fumarate hydratase class I aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.540 |
EEX94992.1 | EEX92893.1 | VIA_000455 | VIA_003538 | Hypothetical protein. | Hypothetical protein. | 0.441 |
EEX94992.1 | EEX93003.1 | VIA_000455 | VIA_003648 | Hypothetical protein. | Hypothetical protein. | 0.540 |
EEX94992.1 | EEX94492.1 | VIA_000455 | VIA_001652 | Hypothetical protein. | Chitinase. | 0.453 |
EEX94992.1 | EEX94994.1 | VIA_000455 | VIA_000457 | Hypothetical protein. | Arginine N-succinyltransferase. | 0.634 |
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