STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX93902.1Diguanylate cyclase. (343 aa)    
Predicted Functional Partners:
EEX95413.1
C-di-GMP phosphodiesterase A-related protein.
 
 0.968
EEX93221.1
Sensory box/GGDEF family protein.
 
 0.944
EEX92852.1
Multi-sensor hybrid histidine kinase.
 
 0.938
EEX94662.1
Response regulator VieA.
 
 
 0.936
EEX91917.1
Response regulator VieA.
 
 
 0.933
EEX94479.1
Putative diguanylate phosphodiesterase (EAL domain).
 
 
 0.928
EEX93913.1
Hypothetical protein.
 
 0.922
EEX94616.1
Hypothetical protein.
 
 
 0.919
EEX93220.1
Aerobic respiration control sensor protein ArcB.
  
 0.918
EEX93557.1
Signal transduction histidine kinase.
 
 
 0.915
Your Current Organism:
Vibrio orientalis
NCBI taxonomy Id: 675816
Other names: V. orientalis CIP 102891 = ATCC 33934, Vibrio orientalis ATCC 33934, Vibrio orientalis ATCC 33934 = CIP 102891, Vibrio orientalis CIP 102891, Vibrio orientalis CIP 102891 = ATCC 33934, Vibrio orientalis IFO 15638, Vibrio orientalis LMG 7987
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