Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEX91514.1 | EEX93967.1 | VIA_002156 | VIA_001125 | Phosphotransferase system EIIBC component. | acetoacetyl-CoA reductase. | 0.817 |
EEX92788.1 | EEX92791.1 | VIA_003433 | VIA_003436 | 3-oxoacyl-[acyl-carrier-protein] synthase KASII; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Malonyl CoA-acyl carrier protein transacylase. | 0.998 |
EEX92788.1 | EEX93967.1 | VIA_003433 | VIA_001125 | 3-oxoacyl-[acyl-carrier-protein] synthase KASII; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | acetoacetyl-CoA reductase. | 0.829 |
EEX92791.1 | EEX92788.1 | VIA_003436 | VIA_003433 | Malonyl CoA-acyl carrier protein transacylase. | 3-oxoacyl-[acyl-carrier-protein] synthase KASII; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.998 |
EEX92791.1 | EEX93967.1 | VIA_003436 | VIA_001125 | Malonyl CoA-acyl carrier protein transacylase. | acetoacetyl-CoA reductase. | 0.854 |
EEX93223.1 | EEX93724.1 | VIA_003870 | VIA_000881 | Glutamate synthase [NADPH] large chain. | Flavodoxin reductases, family 1. | 0.408 |
EEX93223.1 | EEX93891.1 | VIA_003870 | VIA_001049 | Glutamate synthase [NADPH] large chain. | Predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing. | 0.954 |
EEX93223.1 | EEX93967.1 | VIA_003870 | VIA_001125 | Glutamate synthase [NADPH] large chain. | acetoacetyl-CoA reductase. | 0.866 |
EEX93223.1 | EEX94640.1 | VIA_003870 | VIA_001800 | Glutamate synthase [NADPH] large chain. | NADH oxidoreductase Hcr. | 0.408 |
EEX93223.1 | gltB | VIA_003870 | VIA_003872 | Glutamate synthase [NADPH] large chain. | Glutamate synthase [NADPH] large chain. | 0.999 |
EEX93724.1 | EEX93223.1 | VIA_000881 | VIA_003870 | Flavodoxin reductases, family 1. | Glutamate synthase [NADPH] large chain. | 0.408 |
EEX93724.1 | EEX93891.1 | VIA_000881 | VIA_001049 | Flavodoxin reductases, family 1. | Predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing. | 0.651 |
EEX93724.1 | EEX93967.1 | VIA_000881 | VIA_001125 | Flavodoxin reductases, family 1. | acetoacetyl-CoA reductase. | 0.843 |
EEX93724.1 | EEX94640.1 | VIA_000881 | VIA_001800 | Flavodoxin reductases, family 1. | NADH oxidoreductase Hcr. | 0.864 |
EEX93724.1 | gltB | VIA_000881 | VIA_003872 | Flavodoxin reductases, family 1. | Glutamate synthase [NADPH] large chain. | 0.408 |
EEX93891.1 | EEX93223.1 | VIA_001049 | VIA_003870 | Predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing. | Glutamate synthase [NADPH] large chain. | 0.954 |
EEX93891.1 | EEX93724.1 | VIA_001049 | VIA_000881 | Predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing. | Flavodoxin reductases, family 1. | 0.651 |
EEX93891.1 | EEX93967.1 | VIA_001049 | VIA_001125 | Predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing. | acetoacetyl-CoA reductase. | 0.809 |
EEX93891.1 | EEX93968.1 | VIA_001049 | VIA_001126 | Predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing. | 3-ketoacyl-CoA thiolase; Enzyme with broad specificity; acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.479 |
EEX93891.1 | EEX94640.1 | VIA_001049 | VIA_001800 | Predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing. | NADH oxidoreductase Hcr. | 0.535 |
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