Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEX92646.1 | EEX92881.1 | VIA_003291 | VIA_003526 | Biotin sulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 2-enoate reductase (Two distinct NAD(FAD)-dependent dehydrogenase domains). | 0.745 |
EEX92646.1 | EEX94181.1 | VIA_003291 | VIA_001339 | Biotin sulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Putative NADP-dependent oxidoreductase. | 0.433 |
EEX92881.1 | EEX92646.1 | VIA_003526 | VIA_003291 | 2-enoate reductase (Two distinct NAD(FAD)-dependent dehydrogenase domains). | Biotin sulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.745 |
EEX92881.1 | EEX93610.1 | VIA_003526 | VIA_000767 | 2-enoate reductase (Two distinct NAD(FAD)-dependent dehydrogenase domains). | Aspartate ammonia-lyase. | 0.761 |
EEX92881.1 | EEX94181.1 | VIA_003526 | VIA_001339 | 2-enoate reductase (Two distinct NAD(FAD)-dependent dehydrogenase domains). | Putative NADP-dependent oxidoreductase. | 0.476 |
EEX92881.1 | sucD | VIA_003526 | VIA_002289 | 2-enoate reductase (Two distinct NAD(FAD)-dependent dehydrogenase domains). | succinyl-CoA ligase [ADP-forming] alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.778 |
EEX93610.1 | EEX92881.1 | VIA_000767 | VIA_003526 | Aspartate ammonia-lyase. | 2-enoate reductase (Two distinct NAD(FAD)-dependent dehydrogenase domains). | 0.761 |
EEX93610.1 | EEX94181.1 | VIA_000767 | VIA_001339 | Aspartate ammonia-lyase. | Putative NADP-dependent oxidoreductase. | 0.553 |
EEX93610.1 | sucD | VIA_000767 | VIA_002289 | Aspartate ammonia-lyase. | succinyl-CoA ligase [ADP-forming] alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.923 |
EEX93737.1 | EEX94181.1 | VIA_000894 | VIA_001339 | FrnE protein. | Putative NADP-dependent oxidoreductase. | 0.402 |
EEX94180.1 | EEX94181.1 | VIA_001338 | VIA_001339 | Transcriptional regulator. | Putative NADP-dependent oxidoreductase. | 0.642 |
EEX94180.1 | EEX94182.1 | VIA_001338 | VIA_001340 | Transcriptional regulator. | Glutathione S-transferase. | 0.565 |
EEX94181.1 | EEX92646.1 | VIA_001339 | VIA_003291 | Putative NADP-dependent oxidoreductase. | Biotin sulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.433 |
EEX94181.1 | EEX92881.1 | VIA_001339 | VIA_003526 | Putative NADP-dependent oxidoreductase. | 2-enoate reductase (Two distinct NAD(FAD)-dependent dehydrogenase domains). | 0.476 |
EEX94181.1 | EEX93610.1 | VIA_001339 | VIA_000767 | Putative NADP-dependent oxidoreductase. | Aspartate ammonia-lyase. | 0.553 |
EEX94181.1 | EEX93737.1 | VIA_001339 | VIA_000894 | Putative NADP-dependent oxidoreductase. | FrnE protein. | 0.402 |
EEX94181.1 | EEX94180.1 | VIA_001339 | VIA_001338 | Putative NADP-dependent oxidoreductase. | Transcriptional regulator. | 0.642 |
EEX94181.1 | EEX94182.1 | VIA_001339 | VIA_001340 | Putative NADP-dependent oxidoreductase. | Glutathione S-transferase. | 0.862 |
EEX94181.1 | EEX94183.1 | VIA_001339 | VIA_001341 | Putative NADP-dependent oxidoreductase. | Hypothetical protein. | 0.531 |
EEX94181.1 | katG | VIA_001339 | VIA_001342 | Putative NADP-dependent oxidoreductase. | Catalase/peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.552 |
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