STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX94241.1GGDEF family protein. (351 aa)    
Predicted Functional Partners:
EEX92852.1
Multi-sensor hybrid histidine kinase.
  
 0.895
EEX94662.1
Response regulator VieA.
 
 
 0.894
EEX93220.1
Aerobic respiration control sensor protein ArcB.
  
 0.870
EEX93731.1
Hypothetical protein.
 
  0.866
EEX93557.1
Signal transduction histidine kinase.
  
 
 0.859
EEX93908.1
Predicted signal transduction protein.
 
  0.859
EEX92656.1
Hypothetical protein.
 
  0.859
EEX93913.1
Hypothetical protein.
  
 0.858
EEX92655.1
Hypothetical protein.
 
  0.858
EEX95413.1
C-di-GMP phosphodiesterase A-related protein.
 
0.853
Your Current Organism:
Vibrio orientalis
NCBI taxonomy Id: 675816
Other names: V. orientalis CIP 102891 = ATCC 33934, Vibrio orientalis ATCC 33934, Vibrio orientalis ATCC 33934 = CIP 102891, Vibrio orientalis CIP 102891, Vibrio orientalis CIP 102891 = ATCC 33934, Vibrio orientalis IFO 15638, Vibrio orientalis LMG 7987
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.