STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX94332.1Curli production assembly/transport component CsgF. (136 aa)    
Predicted Functional Partners:
EEX94331.1
Curli production assembly/transport component CsgG.
 
 
 0.999
EEX94333.1
Curli production assembly/transport component CsgE.
  
  
 0.978
EEX93005.1
Hypothetical protein.
  
 
 0.971
EEX93646.1
Transcriptional regulator VpsT.
 
  
 0.832
EEX93383.1
DNA-binding HTH domain-containing protein.
  
  
 0.797
EEX94863.1
Transcriptional regulator TetR family associated with agmatine catabolism.
  
     0.550
EEX94334.1
Minor curlin subunit CsgB.
     
 0.460
EEX93421.1
Bacterioferritin-associated ferredoxin.
  
     0.443
Your Current Organism:
Vibrio orientalis
NCBI taxonomy Id: 675816
Other names: V. orientalis CIP 102891 = ATCC 33934, Vibrio orientalis ATCC 33934, Vibrio orientalis ATCC 33934 = CIP 102891, Vibrio orientalis CIP 102891, Vibrio orientalis CIP 102891 = ATCC 33934, Vibrio orientalis IFO 15638, Vibrio orientalis LMG 7987
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.