STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX94417.1ABC transporter transmembrane region. (704 aa)    
Predicted Functional Partners:
EEX94414.1
ABC-type protease exporter membrane fusion protein (MFP) family component PrtE/AprE.
 0.998
EEX94167.1
Utilization protein for catechol-siderophore.
   
  0.977
EEX94415.1
Predicted periplasmic protein.
 
   
 0.949
EEX92325.1
ABC-type multidrug transport system ATPase and permease component.
 
 
0.928
msbA
Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
 
 
0.925
EEX92295.1
Putative outer membrane adhesin like proteiin.
 
  
 0.921
EEX93965.1
ABC transporter transmembrane region.
   
0.920
EEX93966.1
HlyB/MsbA family ABC transporter.
   
0.920
EEX94686.1
ABC transporter ATP-binding protein.
   
0.920
EEX92624.1
Putative ATP-binding/permease fusionABC transporter.
   
0.920
Your Current Organism:
Vibrio orientalis
NCBI taxonomy Id: 675816
Other names: V. orientalis CIP 102891 = ATCC 33934, Vibrio orientalis ATCC 33934, Vibrio orientalis ATCC 33934 = CIP 102891, Vibrio orientalis CIP 102891, Vibrio orientalis CIP 102891 = ATCC 33934, Vibrio orientalis IFO 15638, Vibrio orientalis LMG 7987
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