STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX94418.1Chitinase. (843 aa)    
Predicted Functional Partners:
EEX94089.1
Chitodextrinase precursor.
 
 
0.995
EEX95382.1
Beta-hexosaminidase.
 
  
 0.968
EEX94524.1
Spindolin-related protein.
 
0.967
EEX94492.1
Chitinase.
 
  
 0.966
EEX91622.1
Beta-hexosaminidase.
 
  
 0.966
EEX94503.1
Microbial collagenase secreted.
 
 
 0.946
EEX94712.1
Beta-hexosaminidase.
 
  
 0.939
EEX91990.1
Hypothetical protein.
    
 
 0.935
EEX92443.1
TonB system biopolymer transport component; Most likely function alternative not yet resolved; chromosome segregation ATPase.
    
 
 0.935
nagZ
Beta N-acetyl-glucosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
  
 
 0.908
Your Current Organism:
Vibrio orientalis
NCBI taxonomy Id: 675816
Other names: V. orientalis CIP 102891 = ATCC 33934, Vibrio orientalis ATCC 33934, Vibrio orientalis ATCC 33934 = CIP 102891, Vibrio orientalis CIP 102891, Vibrio orientalis CIP 102891 = ATCC 33934, Vibrio orientalis IFO 15638, Vibrio orientalis LMG 7987
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.