Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEX94462.1 | EEX94594.1 | VIA_001622 | VIA_001754 | Hypothetical protein. | Cytochrome oxidase biogenesis protein Surf1 facilitates heme A insertion. | 0.714 |
EEX94462.1 | secY | VIA_001622 | VIA_000416 | Hypothetical protein. | Preprotein translocase SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.714 |
EEX94592.1 | EEX94593.1 | VIA_001752 | VIA_001753 | Heme A synthase cytochrome oxidase biogenesis protein Cox15-CtaA. | Hypothetical protein. | 0.974 |
EEX94592.1 | EEX94594.1 | VIA_001752 | VIA_001754 | Heme A synthase cytochrome oxidase biogenesis protein Cox15-CtaA. | Cytochrome oxidase biogenesis protein Surf1 facilitates heme A insertion. | 0.993 |
EEX94592.1 | EEX94596.1 | VIA_001752 | VIA_001756 | Heme A synthase cytochrome oxidase biogenesis protein Cox15-CtaA. | Cytochrome c oxidase polypeptide III. | 0.955 |
EEX94592.1 | EEX94597.1 | VIA_001752 | VIA_001757 | Heme A synthase cytochrome oxidase biogenesis protein Cox15-CtaA. | Cytochrome oxidase biogenesis protein Cox11-CtaG copper delivery to Cox1. | 0.976 |
EEX94592.1 | EEX94598.1 | VIA_001752 | VIA_001758 | Heme A synthase cytochrome oxidase biogenesis protein Cox15-CtaA. | Cytochrome c oxidase polypeptide I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.955 |
EEX94592.1 | EEX94599.1 | VIA_001752 | VIA_001759 | Heme A synthase cytochrome oxidase biogenesis protein Cox15-CtaA. | Cytochrome c oxidase polypeptide II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.984 |
EEX94592.1 | cyoE | VIA_001752 | VIA_001751 | Heme A synthase cytochrome oxidase biogenesis protein Cox15-CtaA. | Heme O synthase protoheme IX farnesyltransferase COX10-CtaB; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.999 |
EEX94593.1 | EEX94592.1 | VIA_001753 | VIA_001752 | Hypothetical protein. | Heme A synthase cytochrome oxidase biogenesis protein Cox15-CtaA. | 0.974 |
EEX94593.1 | EEX94594.1 | VIA_001753 | VIA_001754 | Hypothetical protein. | Cytochrome oxidase biogenesis protein Surf1 facilitates heme A insertion. | 0.974 |
EEX94593.1 | EEX94596.1 | VIA_001753 | VIA_001756 | Hypothetical protein. | Cytochrome c oxidase polypeptide III. | 0.809 |
EEX94593.1 | EEX94597.1 | VIA_001753 | VIA_001757 | Hypothetical protein. | Cytochrome oxidase biogenesis protein Cox11-CtaG copper delivery to Cox1. | 0.838 |
EEX94593.1 | EEX94598.1 | VIA_001753 | VIA_001758 | Hypothetical protein. | Cytochrome c oxidase polypeptide I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.690 |
EEX94593.1 | EEX94599.1 | VIA_001753 | VIA_001759 | Hypothetical protein. | Cytochrome c oxidase polypeptide II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.985 |
EEX94593.1 | cyoE | VIA_001753 | VIA_001751 | Hypothetical protein. | Heme O synthase protoheme IX farnesyltransferase COX10-CtaB; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.924 |
EEX94594.1 | EEX94462.1 | VIA_001754 | VIA_001622 | Cytochrome oxidase biogenesis protein Surf1 facilitates heme A insertion. | Hypothetical protein. | 0.714 |
EEX94594.1 | EEX94592.1 | VIA_001754 | VIA_001752 | Cytochrome oxidase biogenesis protein Surf1 facilitates heme A insertion. | Heme A synthase cytochrome oxidase biogenesis protein Cox15-CtaA. | 0.993 |
EEX94594.1 | EEX94593.1 | VIA_001754 | VIA_001753 | Cytochrome oxidase biogenesis protein Surf1 facilitates heme A insertion. | Hypothetical protein. | 0.974 |
EEX94594.1 | EEX94596.1 | VIA_001754 | VIA_001756 | Cytochrome oxidase biogenesis protein Surf1 facilitates heme A insertion. | Cytochrome c oxidase polypeptide III. | 0.886 |
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