STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX94672.1Permease of the major facilitator superfamily. (392 aa)    
Predicted Functional Partners:
EEX93168.1
Hypothetical protein; Belongs to the UPF0246 family.
  
    0.848
EEX93866.1
Hypothetical protein.
  
     0.513
flgG
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
   
   0.507
EEX94567.1
Hypothetical protein.
  
     0.438
EEX92844.1
TRAP-type C4-dicarboxylate transport system small permease component.
  
     0.431
EEX94673.1
Histone acetyltransferase HPA2.
       0.423
Your Current Organism:
Vibrio orientalis
NCBI taxonomy Id: 675816
Other names: V. orientalis CIP 102891 = ATCC 33934, Vibrio orientalis ATCC 33934, Vibrio orientalis ATCC 33934 = CIP 102891, Vibrio orientalis CIP 102891, Vibrio orientalis CIP 102891 = ATCC 33934, Vibrio orientalis IFO 15638, Vibrio orientalis LMG 7987
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.