STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX94773.1Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family. (295 aa)    
Predicted Functional Partners:
EEX94774.1
Protein ydhR precursor.
       0.561
EEX94775.1
Hypothetical protein.
       0.538
EEX94560.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.529
EEX94256.1
Putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.458
EEX94772.1
Galactoside O-acetyltransferase.
       0.453
EEX94561.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.434
Your Current Organism:
Vibrio orientalis
NCBI taxonomy Id: 675816
Other names: V. orientalis CIP 102891 = ATCC 33934, Vibrio orientalis ATCC 33934, Vibrio orientalis ATCC 33934 = CIP 102891, Vibrio orientalis CIP 102891, Vibrio orientalis CIP 102891 = ATCC 33934, Vibrio orientalis IFO 15638, Vibrio orientalis LMG 7987
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.