Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEX91800.1 | EEX92201.1 | VIA_002442 | VIA_002845 | ClpB protein; Belongs to the ClpA/ClpB family. | Hypothetical protein. | 0.734 |
EEX91800.1 | EEX94005.1 | VIA_002442 | VIA_001163 | ClpB protein; Belongs to the ClpA/ClpB family. | DnaJ-class molecular chaperone. | 0.734 |
EEX91800.1 | EEX94174.1 | VIA_002442 | VIA_001332 | ClpB protein; Belongs to the ClpA/ClpB family. | Hypothetical protein. | 0.416 |
EEX91800.1 | EEX94891.1 | VIA_002442 | VIA_002053 | ClpB protein; Belongs to the ClpA/ClpB family. | Putative heat shock protein YegD. | 0.854 |
EEX91800.1 | dnaJ | VIA_002442 | VIA_002242 | ClpB protein; Belongs to the ClpA/ClpB family. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.760 |
EEX91800.1 | groEL | VIA_002442 | VIA_000501 | ClpB protein; Belongs to the ClpA/ClpB family. | Heat shock protein 60 family chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.664 |
EEX91800.1 | grpE | VIA_002442 | VIA_002239 | ClpB protein; Belongs to the ClpA/ClpB family. | Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...] | 0.755 |
EEX91800.1 | htpG | VIA_002442 | VIA_003662 | ClpB protein; Belongs to the ClpA/ClpB family. | Chaperone protein HtpG; Molecular chaperone. Has ATPase activity. | 0.697 |
EEX92201.1 | EEX91800.1 | VIA_002845 | VIA_002442 | Hypothetical protein. | ClpB protein; Belongs to the ClpA/ClpB family. | 0.734 |
EEX92201.1 | EEX94174.1 | VIA_002845 | VIA_001332 | Hypothetical protein. | Hypothetical protein. | 0.918 |
EEX92201.1 | EEX94891.1 | VIA_002845 | VIA_002053 | Hypothetical protein. | Putative heat shock protein YegD. | 0.970 |
EEX92201.1 | clpB | VIA_002845 | VIA_000386 | Hypothetical protein. | ClpB protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.734 |
EEX92201.1 | groEL | VIA_002845 | VIA_000501 | Hypothetical protein. | Heat shock protein 60 family chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.853 |
EEX92201.1 | grpE | VIA_002845 | VIA_002239 | Hypothetical protein. | Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...] | 0.886 |
EEX92201.1 | htpG | VIA_002845 | VIA_003662 | Hypothetical protein. | Chaperone protein HtpG; Molecular chaperone. Has ATPase activity. | 0.992 |
EEX92201.1 | rplP | VIA_002845 | VIA_000429 | Hypothetical protein. | LSU ribosomal protein L16p (L10e); Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.903 |
EEX94005.1 | EEX91800.1 | VIA_001163 | VIA_002442 | DnaJ-class molecular chaperone. | ClpB protein; Belongs to the ClpA/ClpB family. | 0.734 |
EEX94005.1 | EEX94174.1 | VIA_001163 | VIA_001332 | DnaJ-class molecular chaperone. | Hypothetical protein. | 0.918 |
EEX94005.1 | EEX94891.1 | VIA_001163 | VIA_002053 | DnaJ-class molecular chaperone. | Putative heat shock protein YegD. | 0.970 |
EEX94005.1 | clpB | VIA_001163 | VIA_000386 | DnaJ-class molecular chaperone. | ClpB protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.734 |
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