STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX92299.1tRNA 2-thiouridine synthesizing protein E; Part of a sulfur-relay system. (109 aa)    
Predicted Functional Partners:
EEX93428.1
tRNA 5-methylaminomethyl-2-thiouridine synthase TusD.
 
 
 0.948
EEX93426.1
tRNA 5-methylaminomethyl-2-thiouridine synthase TusB.
 
 
 0.848
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
   
 0.810
EEX93427.1
tRNA 5-methylaminomethyl-2-thiouridine synthase TusC; Belongs to the DsrF/TusC family.
 
  
 0.675
EEX92700.1
NADH dehydrogenase.
    
 0.663
EEX92300.1
Putative TEGT family carrier/transport protein; Belongs to the BI1 family.
     
 0.582
EEX93891.1
Predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing.
 
 
 
 0.568
EEX93832.1
Glycosyl transferase family 3.
 
    0.554
EEX92205.1
Fe-S oxidoreductase; Similar to lactate dehydrogenase SO1521.
   
 
 0.512
thiI
Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
      
 0.439
Your Current Organism:
Vibrio orientalis
NCBI taxonomy Id: 675816
Other names: V. orientalis CIP 102891 = ATCC 33934, Vibrio orientalis ATCC 33934, Vibrio orientalis ATCC 33934 = CIP 102891, Vibrio orientalis CIP 102891, Vibrio orientalis CIP 102891 = ATCC 33934, Vibrio orientalis IFO 15638, Vibrio orientalis LMG 7987
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