STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX92443.1TonB system biopolymer transport component; Most likely function alternative not yet resolved; chromosome segregation ATPase. (245 aa)    
Predicted Functional Partners:
EEX92442.1
MotA/TolQ/ExbB proton channel family protein.
 
  
 0.955
EEX94089.1
Chitodextrinase precursor.
    
 
 0.935
EEX94418.1
Chitinase.
    
 
 0.935
EEX92441.1
Ferric siderophore transport system biopolymer transport protein ExbB.
 
  
 0.925
EEX92440.1
TolR protein.
 
   
 0.912
EEX92438.1
tPR domain protein putative component of TonB system.
 
 
 0.903
EEX92439.1
Ferric siderophore transport system binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
   
 0.895
EEX92891.1
Histone deacetylase/AcuC/AphA family protein.
   
 0.874
EEX93557.1
Signal transduction histidine kinase.
   
  0.872
EEX92408.1
Signal transduction histidine kinase.
  
  0.856
Your Current Organism:
Vibrio orientalis
NCBI taxonomy Id: 675816
Other names: V. orientalis CIP 102891 = ATCC 33934, Vibrio orientalis ATCC 33934, Vibrio orientalis ATCC 33934 = CIP 102891, Vibrio orientalis CIP 102891, Vibrio orientalis CIP 102891 = ATCC 33934, Vibrio orientalis IFO 15638, Vibrio orientalis LMG 7987
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