Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEX92408.1 | EEX92438.1 | VIA_003053 | VIA_003083 | Signal transduction histidine kinase. | tPR domain protein putative component of TonB system. | 0.601 |
EEX92408.1 | EEX92443.1 | VIA_003053 | VIA_003088 | Signal transduction histidine kinase. | TonB system biopolymer transport component; Most likely function alternative not yet resolved; chromosome segregation ATPase. | 0.856 |
EEX92408.1 | EEX93557.1 | VIA_003053 | VIA_000714 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.998 |
EEX92438.1 | EEX92408.1 | VIA_003083 | VIA_003053 | tPR domain protein putative component of TonB system. | Signal transduction histidine kinase. | 0.601 |
EEX92438.1 | EEX92439.1 | VIA_003083 | VIA_003084 | tPR domain protein putative component of TonB system. | Ferric siderophore transport system binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.954 |
EEX92438.1 | EEX92440.1 | VIA_003083 | VIA_003085 | tPR domain protein putative component of TonB system. | TolR protein. | 0.811 |
EEX92438.1 | EEX92441.1 | VIA_003083 | VIA_003086 | tPR domain protein putative component of TonB system. | Ferric siderophore transport system biopolymer transport protein ExbB. | 0.853 |
EEX92438.1 | EEX92442.1 | VIA_003083 | VIA_003087 | tPR domain protein putative component of TonB system. | MotA/TolQ/ExbB proton channel family protein. | 0.885 |
EEX92438.1 | EEX92443.1 | VIA_003083 | VIA_003088 | tPR domain protein putative component of TonB system. | TonB system biopolymer transport component; Most likely function alternative not yet resolved; chromosome segregation ATPase. | 0.903 |
EEX92438.1 | EEX92891.1 | VIA_003083 | VIA_003536 | tPR domain protein putative component of TonB system. | Histone deacetylase/AcuC/AphA family protein. | 0.736 |
EEX92438.1 | EEX93557.1 | VIA_003083 | VIA_000714 | tPR domain protein putative component of TonB system. | Signal transduction histidine kinase. | 0.770 |
EEX92439.1 | EEX92438.1 | VIA_003084 | VIA_003083 | Ferric siderophore transport system binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | tPR domain protein putative component of TonB system. | 0.954 |
EEX92439.1 | EEX92440.1 | VIA_003084 | VIA_003085 | Ferric siderophore transport system binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | TolR protein. | 0.995 |
EEX92439.1 | EEX92441.1 | VIA_003084 | VIA_003086 | Ferric siderophore transport system binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Ferric siderophore transport system biopolymer transport protein ExbB. | 0.985 |
EEX92439.1 | EEX92442.1 | VIA_003084 | VIA_003087 | Ferric siderophore transport system binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | MotA/TolQ/ExbB proton channel family protein. | 0.984 |
EEX92439.1 | EEX92443.1 | VIA_003084 | VIA_003088 | Ferric siderophore transport system binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | TonB system biopolymer transport component; Most likely function alternative not yet resolved; chromosome segregation ATPase. | 0.895 |
EEX92440.1 | EEX92438.1 | VIA_003085 | VIA_003083 | TolR protein. | tPR domain protein putative component of TonB system. | 0.811 |
EEX92440.1 | EEX92439.1 | VIA_003085 | VIA_003084 | TolR protein. | Ferric siderophore transport system binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.995 |
EEX92440.1 | EEX92441.1 | VIA_003085 | VIA_003086 | TolR protein. | Ferric siderophore transport system biopolymer transport protein ExbB. | 0.995 |
EEX92440.1 | EEX92442.1 | VIA_003085 | VIA_003087 | TolR protein. | MotA/TolQ/ExbB proton channel family protein. | 0.993 |
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