Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEX92355.1 | EEX92520.1 | VIA_003000 | VIA_003165 | Fumarate and nitrate reduction regulatory protein. | Hypothetical protein. | 0.819 |
EEX92355.1 | EEX94991.1 | VIA_003000 | VIA_000454 | Fumarate and nitrate reduction regulatory protein. | Cyclic AMP receptor protein. | 0.629 |
EEX92520.1 | EEX92355.1 | VIA_003165 | VIA_003000 | Hypothetical protein. | Fumarate and nitrate reduction regulatory protein. | 0.819 |
EEX92520.1 | EEX92660.1 | VIA_003165 | VIA_003305 | Hypothetical protein. | Sensor histidine kinase. | 0.820 |
EEX92520.1 | EEX93939.1 | VIA_003165 | VIA_001097 | Hypothetical protein. | cAMP-binding protein; Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | 0.819 |
EEX92520.1 | EEX94941.1 | VIA_003165 | VIA_000404 | Hypothetical protein. | cAMP-binding protein; Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | 0.819 |
EEX92520.1 | EEX94991.1 | VIA_003165 | VIA_000454 | Hypothetical protein. | Cyclic AMP receptor protein. | 0.819 |
EEX92520.1 | folE | VIA_003165 | VIA_001286 | Hypothetical protein. | GTP cyclohydrolase I type 1. | 0.908 |
EEX92520.1 | nrdG | VIA_003165 | VIA_001138 | Hypothetical protein. | Ribonucleotide reductase of class III (anaerobic) activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | 0.913 |
EEX92520.1 | queC | VIA_003165 | VIA_002935 | Hypothetical protein. | Queuosine Biosynthesis QueC ATPase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | 0.946 |
EEX92520.1 | queE | VIA_003165 | VIA_002934 | Hypothetical protein. | Queuosine Biosynthesis QueE Radical SAM; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.918 |
EEX92520.1 | queF | VIA_003165 | VIA_002313 | Hypothetical protein. | NADPH dependent preQ0 reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). | 0.888 |
EEX92660.1 | EEX92520.1 | VIA_003305 | VIA_003165 | Sensor histidine kinase. | Hypothetical protein. | 0.820 |
EEX93939.1 | EEX92520.1 | VIA_001097 | VIA_003165 | cAMP-binding protein; Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | Hypothetical protein. | 0.819 |
EEX93939.1 | EEX94991.1 | VIA_001097 | VIA_000454 | cAMP-binding protein; Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | Cyclic AMP receptor protein. | 0.547 |
EEX94941.1 | EEX92520.1 | VIA_000404 | VIA_003165 | cAMP-binding protein; Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | Hypothetical protein. | 0.819 |
EEX94941.1 | EEX94991.1 | VIA_000404 | VIA_000454 | cAMP-binding protein; Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | Cyclic AMP receptor protein. | 0.547 |
EEX94991.1 | EEX92355.1 | VIA_000454 | VIA_003000 | Cyclic AMP receptor protein. | Fumarate and nitrate reduction regulatory protein. | 0.629 |
EEX94991.1 | EEX92520.1 | VIA_000454 | VIA_003165 | Cyclic AMP receptor protein. | Hypothetical protein. | 0.819 |
EEX94991.1 | EEX93939.1 | VIA_000454 | VIA_001097 | Cyclic AMP receptor protein. | cAMP-binding protein; Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | 0.547 |
page 1 of 3