STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX92602.1GGDEF family protein. (338 aa)    
Predicted Functional Partners:
EEX93750.1
Pole remodelling regulatory diguanylate cyclase.
 
 
  0.911
EEX94662.1
Response regulator VieA.
 
 0.901
EEX92852.1
Multi-sensor hybrid histidine kinase.
  
 0.895
EEX93731.1
Hypothetical protein.
  0.878
EEX95144.1
GGDEF family protein.
  0.877
EEX93557.1
Signal transduction histidine kinase.
 
 0.871
EEX93220.1
Aerobic respiration control sensor protein ArcB.
 
 0.870
EEX94663.1
Sensory box sensor histidine kinase/response regulator VieS.
  
 0.865
EEX91916.1
Putative sensory box sensor histidine kinase/response regulator VieS.
  
 0.865
EEX91917.1
Response regulator VieA.
 0.861
Your Current Organism:
Vibrio orientalis
NCBI taxonomy Id: 675816
Other names: V. orientalis CIP 102891 = ATCC 33934, Vibrio orientalis ATCC 33934, Vibrio orientalis ATCC 33934 = CIP 102891, Vibrio orientalis CIP 102891, Vibrio orientalis CIP 102891 = ATCC 33934, Vibrio orientalis IFO 15638, Vibrio orientalis LMG 7987
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.