Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEX92479.1 | EEX94265.1 | VIA_003124 | VIA_001423 | ABC-type antimicrobial peptide transport system permease component. | Hypothetical protein. | 0.667 |
EEX92479.1 | lolA | VIA_003124 | VIA_003459 | ABC-type antimicrobial peptide transport system permease component. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.903 |
EEX92479.1 | lolD | VIA_003124 | VIA_003339 | ABC-type antimicrobial peptide transport system permease component. | Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.859 |
EEX92693.1 | EEX92695.1 | VIA_003338 | VIA_003340 | Lipoprotein releasing system transmembrane protein LolE. | Lipoprotein releasing system transmembrane protein LolC. | 0.943 |
EEX92693.1 | EEX94265.1 | VIA_003338 | VIA_001423 | Lipoprotein releasing system transmembrane protein LolE. | Hypothetical protein. | 0.566 |
EEX92693.1 | lolA | VIA_003338 | VIA_003459 | Lipoprotein releasing system transmembrane protein LolE. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.922 |
EEX92693.1 | lolD | VIA_003338 | VIA_003339 | Lipoprotein releasing system transmembrane protein LolE. | Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.988 |
EEX92695.1 | EEX92693.1 | VIA_003340 | VIA_003338 | Lipoprotein releasing system transmembrane protein LolC. | Lipoprotein releasing system transmembrane protein LolE. | 0.943 |
EEX92695.1 | EEX94265.1 | VIA_003340 | VIA_001423 | Lipoprotein releasing system transmembrane protein LolC. | Hypothetical protein. | 0.566 |
EEX92695.1 | lolA | VIA_003340 | VIA_003459 | Lipoprotein releasing system transmembrane protein LolC. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.926 |
EEX92695.1 | lolD | VIA_003340 | VIA_003339 | Lipoprotein releasing system transmembrane protein LolC. | Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.989 |
EEX93407.1 | EEX94265.1 | VIA_004054 | VIA_001423 | ABC-type antimicrobial peptide transport system permease component. | Hypothetical protein. | 0.549 |
EEX93407.1 | lolA | VIA_004054 | VIA_003459 | ABC-type antimicrobial peptide transport system permease component. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.549 |
EEX93407.1 | lolD | VIA_004054 | VIA_003339 | ABC-type antimicrobial peptide transport system permease component. | Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.859 |
EEX94011.1 | lolD | VIA_001169 | VIA_003339 | Predicted ABC-type transport system permease component. | Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.627 |
EEX94265.1 | EEX92479.1 | VIA_001423 | VIA_003124 | Hypothetical protein. | ABC-type antimicrobial peptide transport system permease component. | 0.667 |
EEX94265.1 | EEX92693.1 | VIA_001423 | VIA_003338 | Hypothetical protein. | Lipoprotein releasing system transmembrane protein LolE. | 0.566 |
EEX94265.1 | EEX92695.1 | VIA_001423 | VIA_003340 | Hypothetical protein. | Lipoprotein releasing system transmembrane protein LolC. | 0.566 |
EEX94265.1 | EEX93407.1 | VIA_001423 | VIA_004054 | Hypothetical protein. | ABC-type antimicrobial peptide transport system permease component. | 0.549 |
EEX94265.1 | EEX94266.1 | VIA_001423 | VIA_001424 | Hypothetical protein. | ABC-type transport system involved in lipoprotein release permease component. | 0.975 |
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