Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEX91526.1 | EEX92627.1 | VIA_002168 | VIA_003272 | Ferredoxin. | Nitrate reductase; Ferredoxin-type protein NapF; periplasmic. | 0.483 |
EEX91526.1 | rnfA | VIA_002168 | VIA_003586 | Ferredoxin. | Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.868 |
EEX91526.1 | rnfB | VIA_002168 | VIA_003587 | Ferredoxin. | Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.561 |
EEX91526.1 | rnfC | VIA_002168 | VIA_003588 | Ferredoxin. | Electron transport complex protein RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. | 0.911 |
EEX91526.1 | rnfD | VIA_002168 | VIA_003589 | Ferredoxin. | Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | 0.868 |
EEX91526.1 | rnfE | VIA_002168 | VIA_003591 | Ferredoxin. | Electron transport complex protein RnfE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.868 |
EEX91526.1 | rnfG | VIA_002168 | VIA_003590 | Ferredoxin. | Electron transport complex protein RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family. | 0.868 |
EEX92375.1 | EEX92627.1 | VIA_003020 | VIA_003272 | Iron-sulfur cluster-binding protein. | Nitrate reductase; Ferredoxin-type protein NapF; periplasmic. | 0.870 |
EEX92375.1 | napG | VIA_003020 | VIA_002010 | Iron-sulfur cluster-binding protein. | Ferredoxin-type protein NapG (periplasmic nitrate reductase). | 0.917 |
EEX92375.1 | rnfA | VIA_003020 | VIA_003586 | Iron-sulfur cluster-binding protein. | Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.885 |
EEX92375.1 | rnfB | VIA_003020 | VIA_003587 | Iron-sulfur cluster-binding protein. | Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.804 |
EEX92375.1 | rnfC | VIA_003020 | VIA_003588 | Iron-sulfur cluster-binding protein. | Electron transport complex protein RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. | 0.984 |
EEX92375.1 | rnfD | VIA_003020 | VIA_003589 | Iron-sulfur cluster-binding protein. | Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | 0.884 |
EEX92375.1 | rnfE | VIA_003020 | VIA_003591 | Iron-sulfur cluster-binding protein. | Electron transport complex protein RnfE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.879 |
EEX92375.1 | rnfG | VIA_003020 | VIA_003590 | Iron-sulfur cluster-binding protein. | Electron transport complex protein RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family. | 0.882 |
EEX92627.1 | EEX91526.1 | VIA_003272 | VIA_002168 | Nitrate reductase; Ferredoxin-type protein NapF; periplasmic. | Ferredoxin. | 0.483 |
EEX92627.1 | EEX92375.1 | VIA_003272 | VIA_003020 | Nitrate reductase; Ferredoxin-type protein NapF; periplasmic. | Iron-sulfur cluster-binding protein. | 0.870 |
EEX92627.1 | napG | VIA_003272 | VIA_002010 | Nitrate reductase; Ferredoxin-type protein NapF; periplasmic. | Ferredoxin-type protein NapG (periplasmic nitrate reductase). | 0.970 |
EEX92627.1 | rnfA | VIA_003272 | VIA_003586 | Nitrate reductase; Ferredoxin-type protein NapF; periplasmic. | Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.900 |
EEX92627.1 | rnfB | VIA_003272 | VIA_003587 | Nitrate reductase; Ferredoxin-type protein NapF; periplasmic. | Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.597 |
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