Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEX92606.1 | EEX93027.1 | VIA_003251 | VIA_003674 | Thioredoxin reductase. | Thioredoxin domain-containing protein. | 0.963 |
EEX92606.1 | EEX93499.1 | VIA_003251 | VIA_004146 | Thioredoxin reductase. | Peroxiredoxin family protein/glutaredoxin. | 0.695 |
EEX92606.1 | EEX95553.1 | VIA_003251 | VIA_000085 | Thioredoxin reductase. | Glutathione reductase. | 0.703 |
EEX92606.1 | metH | VIA_003251 | VIA_000149 | Thioredoxin reductase. | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.439 |
EEX92899.1 | EEX93027.1 | VIA_003544 | VIA_003674 | Low molecular weight protein tyrosine phosphatase. | Thioredoxin domain-containing protein. | 0.910 |
EEX92899.1 | EEX95553.1 | VIA_003544 | VIA_000085 | Low molecular weight protein tyrosine phosphatase. | Glutathione reductase. | 0.420 |
EEX93027.1 | EEX92606.1 | VIA_003674 | VIA_003251 | Thioredoxin domain-containing protein. | Thioredoxin reductase. | 0.963 |
EEX93027.1 | EEX92899.1 | VIA_003674 | VIA_003544 | Thioredoxin domain-containing protein. | Low molecular weight protein tyrosine phosphatase. | 0.910 |
EEX93027.1 | EEX93499.1 | VIA_003674 | VIA_004146 | Thioredoxin domain-containing protein. | Peroxiredoxin family protein/glutaredoxin. | 0.823 |
EEX93027.1 | EEX95553.1 | VIA_003674 | VIA_000085 | Thioredoxin domain-containing protein. | Glutathione reductase. | 0.951 |
EEX93027.1 | groEL | VIA_003674 | VIA_000501 | Thioredoxin domain-containing protein. | Heat shock protein 60 family chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.811 |
EEX93027.1 | grpE | VIA_003674 | VIA_002239 | Thioredoxin domain-containing protein. | Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...] | 0.849 |
EEX93027.1 | hslU | VIA_003674 | VIA_004167 | Thioredoxin domain-containing protein. | ATP-dependent hsl protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.875 |
EEX93027.1 | hslV | VIA_003674 | VIA_004168 | Thioredoxin domain-containing protein. | ATP-dependent protease HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.869 |
EEX93027.1 | htpG | VIA_003674 | VIA_003662 | Thioredoxin domain-containing protein. | Chaperone protein HtpG; Molecular chaperone. Has ATPase activity. | 0.837 |
EEX93027.1 | metH | VIA_003674 | VIA_000149 | Thioredoxin domain-containing protein. | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.813 |
EEX93499.1 | EEX92606.1 | VIA_004146 | VIA_003251 | Peroxiredoxin family protein/glutaredoxin. | Thioredoxin reductase. | 0.695 |
EEX93499.1 | EEX93027.1 | VIA_004146 | VIA_003674 | Peroxiredoxin family protein/glutaredoxin. | Thioredoxin domain-containing protein. | 0.823 |
EEX93499.1 | EEX95553.1 | VIA_004146 | VIA_000085 | Peroxiredoxin family protein/glutaredoxin. | Glutathione reductase. | 0.907 |
EEX93499.1 | metH | VIA_004146 | VIA_000149 | Peroxiredoxin family protein/glutaredoxin. | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.799 |
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