Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEX91833.1 | EEX93292.1 | VIA_002475 | VIA_003939 | Protein YciN. | Hypothetical protein. | 0.774 |
EEX91833.1 | EEX93403.1 | VIA_002475 | VIA_004050 | Protein YciN. | Hypothetical protein. | 0.774 |
EEX91833.1 | EEX95474.1 | VIA_002475 | VIA_000006 | Protein YciN. | ATPase of the AAA+ class. | 0.728 |
EEX91833.1 | crl | VIA_002475 | VIA_003769 | Protein YciN. | Transcriptional regulator Crl; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. Stimulates RNA polymerase holoenzyme formation and may bind to several other sigma factors, such as sigma-70 and sigma-32; Belongs to the Crl family. | 0.760 |
EEX91833.1 | cyaA | VIA_002475 | VIA_000055 | Protein YciN. | Adenylate cyclase. | 0.616 |
EEX91833.1 | frsA | VIA_002475 | VIA_003770 | Protein YciN. | Hypothetical protein; Belongs to the UPF0255 family. | 0.764 |
EEX91833.1 | yieM | VIA_002475 | VIA_000986 | Protein YciN. | Hypothetical protein. | 0.750 |
EEX91833.1 | zapB | VIA_002475 | VIA_004178 | Protein YciN. | Hypothetical protein; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA. | 0.427 |
EEX91833.1 | zapC | VIA_002475 | VIA_002978 | Protein YciN. | Hypothetical protein; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ. | 0.715 |
EEX93292.1 | EEX91833.1 | VIA_003939 | VIA_002475 | Hypothetical protein. | Protein YciN. | 0.774 |
EEX93292.1 | EEX95474.1 | VIA_003939 | VIA_000006 | Hypothetical protein. | ATPase of the AAA+ class. | 0.737 |
EEX93292.1 | crl | VIA_003939 | VIA_003769 | Hypothetical protein. | Transcriptional regulator Crl; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. Stimulates RNA polymerase holoenzyme formation and may bind to several other sigma factors, such as sigma-70 and sigma-32; Belongs to the Crl family. | 0.768 |
EEX93292.1 | cyaA | VIA_003939 | VIA_000055 | Hypothetical protein. | Adenylate cyclase. | 0.663 |
EEX93292.1 | frsA | VIA_003939 | VIA_003770 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0255 family. | 0.765 |
EEX93292.1 | yieM | VIA_003939 | VIA_000986 | Hypothetical protein. | Hypothetical protein. | 0.764 |
EEX93292.1 | zapB | VIA_003939 | VIA_004178 | Hypothetical protein. | Hypothetical protein; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA. | 0.580 |
EEX93292.1 | zapC | VIA_003939 | VIA_002978 | Hypothetical protein. | Hypothetical protein; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ. | 0.749 |
EEX93403.1 | EEX91833.1 | VIA_004050 | VIA_002475 | Hypothetical protein. | Protein YciN. | 0.774 |
EEX93403.1 | EEX95474.1 | VIA_004050 | VIA_000006 | Hypothetical protein. | ATPase of the AAA+ class. | 0.669 |
EEX93403.1 | crl | VIA_004050 | VIA_003769 | Hypothetical protein. | Transcriptional regulator Crl; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. Stimulates RNA polymerase holoenzyme formation and may bind to several other sigma factors, such as sigma-70 and sigma-32; Belongs to the Crl family. | 0.758 |
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