Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEX91736.1 | EEX93262.1 | VIA_002378 | VIA_003909 | DedD protein. | Arylsulfatase. | 0.697 |
EEX91736.1 | EEX93440.1 | VIA_002378 | VIA_004087 | DedD protein. | N-acetylmuramoyl-L-alanine amidase AmiB precursor. | 0.775 |
EEX91736.1 | EEX93522.1 | VIA_002378 | VIA_004169 | DedD protein. | Cell division protein. | 0.632 |
EEX91955.1 | EEX93262.1 | VIA_002599 | VIA_003909 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Arylsulfatase. | 0.668 |
EEX91955.1 | EEX93440.1 | VIA_002599 | VIA_004087 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | N-acetylmuramoyl-L-alanine amidase AmiB precursor. | 0.657 |
EEX91955.1 | guaA | VIA_002599 | VIA_002210 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.882 |
EEX91955.1 | guaB | VIA_002599 | VIA_002209 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.901 |
EEX91955.1 | pyrF | VIA_002599 | VIA_003473 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.416 |
EEX93262.1 | EEX91736.1 | VIA_003909 | VIA_002378 | Arylsulfatase. | DedD protein. | 0.697 |
EEX93262.1 | EEX91955.1 | VIA_003909 | VIA_002599 | Arylsulfatase. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.668 |
EEX93262.1 | EEX93440.1 | VIA_003909 | VIA_004087 | Arylsulfatase. | N-acetylmuramoyl-L-alanine amidase AmiB precursor. | 0.868 |
EEX93262.1 | EEX93522.1 | VIA_003909 | VIA_004169 | Arylsulfatase. | Cell division protein. | 0.707 |
EEX93262.1 | EEX95261.1 | VIA_003909 | VIA_000179 | Arylsulfatase. | Nucleoside 5-triphosphatase RdgB (dHAPTP dITP XTP-specific); Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.688 |
EEX93262.1 | cmk | VIA_003909 | VIA_003478 | Arylsulfatase. | Cytidylate kinase. | 0.668 |
EEX93262.1 | cpdA | VIA_003909 | VIA_003862 | Arylsulfatase. | 3',5'-cyclic-nucleotide phosphodiesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes. | 0.709 |
EEX93262.1 | guaA | VIA_003909 | VIA_002210 | Arylsulfatase. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.851 |
EEX93262.1 | guaB | VIA_003909 | VIA_002209 | Arylsulfatase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.848 |
EEX93262.1 | pyrF | VIA_003909 | VIA_003473 | Arylsulfatase. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.676 |
EEX93440.1 | EEX91736.1 | VIA_004087 | VIA_002378 | N-acetylmuramoyl-L-alanine amidase AmiB precursor. | DedD protein. | 0.775 |
EEX93440.1 | EEX91955.1 | VIA_004087 | VIA_002599 | N-acetylmuramoyl-L-alanine amidase AmiB precursor. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.657 |
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