STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX93429.1Hypothetical protein. (240 aa)    
Predicted Functional Partners:
EEX93428.1
tRNA 5-methylaminomethyl-2-thiouridine synthase TusD.
  
    0.797
EEX92682.1
Hypothetical protein; Belongs to the UPF0304 family.
  
     0.688
EEX95474.1
ATPase of the AAA+ class.
  
     0.655
EEX91749.1
Hypothetical protein.
  
     0.586
uspB
Universal stress protein B.
  
     0.557
EEX93427.1
tRNA 5-methylaminomethyl-2-thiouridine synthase TusC; Belongs to the DsrF/TusC family.
  
    0.551
EEX93426.1
tRNA 5-methylaminomethyl-2-thiouridine synthase TusB.
     
 0.542
EEX94065.1
Hypothetical protein.
  
     0.537
EEX92016.1
Hypothetical protein; Belongs to the UPF0263 family.
  
     0.513
EEX94944.1
Hypothetical protein.
  
    0.483
Your Current Organism:
Vibrio orientalis
NCBI taxonomy Id: 675816
Other names: V. orientalis CIP 102891 = ATCC 33934, Vibrio orientalis ATCC 33934, Vibrio orientalis ATCC 33934 = CIP 102891, Vibrio orientalis CIP 102891, Vibrio orientalis CIP 102891 = ATCC 33934, Vibrio orientalis IFO 15638, Vibrio orientalis LMG 7987
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.